Publications (citations)

1. Subramaniam S, Fahy E, Gupta S, Sud M, Byrnes R.W, Cotter D, Dinasarapu A.R and Maurya M.R. (2011) Bioinformatics and Systems Biology of the Lipidome. Chemical Reviews, 111 (10), 6452-6490.
2. Dinasarapu A.R, Saunders B, Ozerlat I, Azam K and Subramaniam S. (2011) Signaling Gateway Molecule Pages - a data model perspective. Bioinformatics, 27(12), 1736-1738.
3. Ashok Reddy D, Prasad B V L S and Mitra C K. (2006) Comparative analysis of core promoter region: Information content from mono and dinucleotide substitution matrices. Computational Biology and Chemistry, 30, 58-62.
4. Ashok Reddy D, Prasad B V L S and Mitra C K. (2006) Functional classification of transcription factor binding sites: Information content as a metric. Journal of Integrative Bioinformatics, 3(1), 0020.
5. Ashok Reddy D and Mitra C K. (2006) Comparative analysis of transcription start site using mutual information. Genomics, Proteomics & Bioinformatics. 4(3), 183-195.

Manuscripts in Preparation

• (2011) Integrated transcriptomic and lipidomic study reveals significant temporal and quantitative differences in inflammatory and lipid metabolic networks between RAW 264.7 cells and Thioglycolate-elicited Macrophages (to be submitted).
• (2011) A Combined Omics analysis of Kdo2-Lipid A primed ATP-stimulated Macrophages: enhanced role of stats in Apoptosis, Immunity and Lipid Metabolism (to be submitted).
• (2012) ChromViz- a java tool to visualize high-throughput (gene expression) data on chromosomes as heat maps and integrated UCSC Genome Browser data.

Research papers reviewed for the International Journals:

• International Journal of Bioinformatics Research and Applications (IJBRA)
• Journal of Bioinformatics and Sequence Analysis (JBSA)
• Journal of Proteomics & Bioinformatics (JPB)
• Journal of Integrative Bioinformatics (JIB)
• Bioinformatics and Biology Insights (BBI)

Conferences & Presentations

• International Conference on Intelligent Systems for Molecular Biology (ISMB) 2010, Boston, Massachusetts, USA (11-13 July, 2010).
• International conference on statistics and informatics in agricultural research. New Delhi, India (27-30 December 2006).
• International workshop on Systems Biology 2006, Hamilton Institute, National University of Ireland Maynooth, Ireland (17-19 July, 2006).
• Wavelet and multifractal analysis 2004 summer school, Cargese, Corsica, France (19-31 July, 2004).
• Oral presentation at the University of Texas, Arlington, USA on 26th June, 2007.
• Oral presentation at the Advanced Technology Centre, Tata Consultancy Services Hyderabad, India. 8th February, 2007.